[Molecularmechanics] Recycling CML

[Konrad Hinsen]

On Tuesday 04 November 2003 22:03, Peter Murray-Rust wrote:


> changed do all the others?) CML also has an inheritance mechanism:
>
> <molecule ref="ala" mode="inherit">
>    <atomArray>
>      <atom ref="calpha" x3="12.3" y3="10.2" z3="2.3"/>
> ...

What are the modifications that are possible with that mechanism? I am 
thinking of the modifications that David presented in his proposal, for 
defining variants of fragments (e.g. the N-terminal variant of an amino acid 
residue). Such a modification involves adding and removing atoms and bonds.

Konrad.
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